Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP50Q70EL3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
USP50Q70EL3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP50Q70EL3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.78■□□□□ 0.44
USP50Q70EL3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP50Q70EL3 AC090502.4-201ENST00000551714 1386 ntBASIC17.78■□□□□ 0.44
USP50Q70EL3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.78■□□□□ 0.44
USP50Q70EL3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 MST1L-201ENST00000442552 2185 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.77■□□□□ 0.44
USP50Q70EL3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 HIST2H2BA-201ENST00000412169 381 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 AL807761.2-201ENST00000422849 729 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 BCAS2P2-201ENST00000425064 674 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.77■□□□□ 0.44
USP50Q70EL3 AC092638.2-201ENST00000441105 947 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
USP50Q70EL3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP50Q70EL3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.77■□□□□ 0.44
USP50Q70EL3 NUDT4P2-201ENST00000578341 546 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.77■□□□□ 0.44
USP50Q70EL3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.77■□□□□ 0.44
USP50Q70EL3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.77■□□□□ 0.44
USP50Q70EL3 AC009560.1-201ENST00000620208 434 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 AC005618.3-201ENST00000624928 458 ntBASIC17.77■□□□□ 0.44
USP50Q70EL3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
USP50Q70EL3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP50Q70EL3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP50Q70EL3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP50Q70EL3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP50Q70EL3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.77■□□□□ 0.43
USP50Q70EL3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP50Q70EL3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP50Q70EL3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
USP50Q70EL3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 LINC01165-201ENST00000445190 1623 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP50Q70EL3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USP50Q70EL3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.76■□□□□ 0.43
USP50Q70EL3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.76■□□□□ 0.43
USP50Q70EL3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 PSMD4P1-201ENST00000433951 1109 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.76■□□□□ 0.43
USP50Q70EL3 RPSAP15-201ENST00000448168 861 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.76■□□□□ 0.43
USP50Q70EL3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.76■□□□□ 0.43
USP50Q70EL3 ALG3P1-201ENST00000508806 1114 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.76■□□□□ 0.43
USP50Q70EL3 DNM1P51-201ENST00000558149 522 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.76■□□□□ 0.43
USP50Q70EL3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.76■□□□□ 0.43
USP50Q70EL3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
USP50Q70EL3 AC027601.3-201ENST00000622907 509 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 AP001184.1-201ENST00000637936 376 ntBASIC17.76■□□□□ 0.43
USP50Q70EL3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.76■□□□□ 0.43
USP50Q70EL3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP50Q70EL3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
USP50Q70EL3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.76■□□□□ 0.43
USP50Q70EL3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP50Q70EL3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP50Q70EL3 AL137783.1-201ENST00000623494 1896 ntBASIC17.75■□□□□ 0.43
USP50Q70EL3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP50Q70EL3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP50Q70EL3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP50Q70EL3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP50Q70EL3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms