Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AL807761.2-201ENST00000422849 729 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC009560.1-201ENST00000620208 434 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AP001094.4-201ENST00000579008 2176 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC025183.3-201ENST00000623526 1482 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 FRMPD2B-201ENST00000431305 1347 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LRRK2Q5S007 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRRK2Q5S007 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LRRK2Q5S007 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRRK2Q5S007 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AF274858.1-201ENST00000406288 372 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 FTH1P22-201ENST00000456305 520 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC005962.1-201ENST00000584100 773 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC004466.1-201ENST00000599515 1080 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC087392.5-201ENST00000612517 489 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 KRT17P5-201ENST00000332088 839 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 BANF1P3-201ENST00000412556 261 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC093826.1-201ENST00000508655 993 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 MIR3180-2-201ENST00000581748 88 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC011462.4-201ENST00000616866 449 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AL139384.1-201ENST00000612143 3047 ntBASIC13.08□□□□□ -0.32
LRRK2Q5S007 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRK2Q5S007 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
LRRK2Q5S007 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 AL929302.1-201ENST00000426556 871 ntBASIC13.07□□□□□ -0.32
LRRK2Q5S007 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 DUTP3-201ENST00000450025 415 ntBASIC13.07□□□□□ -0.32
LRRK2Q5S007 RN7SL81P-201ENST00000493781 261 ntBASIC13.07□□□□□ -0.32
LRRK2Q5S007 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 AC092299.1-201ENST00000632679 757 ntBASIC13.07□□□□□ -0.32
LRRK2Q5S007 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms