Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM71Q2Q1W2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM71Q2Q1W2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 RN7SKP175-201ENST00000408472 289 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 ACTG1P2-201ENST00000415776 1125 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AL008707.1-201ENST00000422498 534 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 ACTG1P11-201ENST00000425411 1125 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 RNMTL1P1-201ENST00000454103 560 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AC005740.2-201ENST00000511085 419 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AL162426.1-201ENST00000624141 743 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 AC008132.1-202ENST00000342005 1389 ntBASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM71Q2Q1W2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AL157414.3-201ENST00000624276 1954 ntBASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 HINT2P1-201ENST00000419438 481 ntBASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC013355.1-201ENST00000562625 723 ntBASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC005324.6-201ENST00000587972 613 ntBASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC009955.4-201ENST00000597192 544 ntBASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM71Q2Q1W2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM71Q2Q1W2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms