Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBQ06643 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBQ06643 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBQ06643 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LTBQ06643 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.11□□□□□ -0.15
LTBQ06643 AL132655.2-201ENST00000596276 594 ntBASIC14.11□□□□□ -0.15
LTBQ06643 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBQ06643 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 AL109936.8-201ENST00000641772 604 ntBASIC14.11□□□□□ -0.15
LTBQ06643 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBQ06643 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.11□□□□□ -0.15
LTBQ06643 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LTBQ06643 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LTBQ06643 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.11□□□□□ -0.15
LTBQ06643 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.1□□□□□ -0.15
LTBQ06643 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 AC004890.2-204ENST00000481968 304 ntBASIC14.1□□□□□ -0.15
LTBQ06643 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 SLED1-202ENST00000512051 380 ntBASIC14.1□□□□□ -0.15
LTBQ06643 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.1□□□□□ -0.15
LTBQ06643 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.1□□□□□ -0.15
LTBQ06643 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.1□□□□□ -0.15
LTBQ06643 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 AL844908.2-201ENST00000609461 460 ntBASIC14.1□□□□□ -0.15
LTBQ06643 AL590560.3-201ENST00000623350 461 ntBASIC14.1□□□□□ -0.15
LTBQ06643 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 AC087499.5-201ENST00000452760 1342 ntBASIC14.1□□□□□ -0.15
LTBQ06643 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.1□□□□□ -0.15
LTBQ06643 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LTBQ06643 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.1□□□□□ -0.15
LTBQ06643 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBQ06643 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.09□□□□□ -0.15
LTBQ06643 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBQ06643 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LTBQ06643 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBQ06643 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBQ06643 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LTBQ06643 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LTBQ06643 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms