Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC026803.1-201ENST00000569130 274 ntBASIC18.67■□□□□ 0.58
SCN7AQ01118 PHBP15-201ENST00000574228 665 ntBASIC18.67■□□□□ 0.58
SCN7AQ01118 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN7AQ01118 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.67■□□□□ 0.58
SCN7AQ01118 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC135983.4-201ENST00000564116 1262 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN7AQ01118 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC009884.2-201ENST00000603110 324 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 AC005632.3-201ENST00000605544 308 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC112693.3-201ENST00000624819 1983 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC074138.1-201ENST00000611182 1303 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AL365203.3-201ENST00000609742 2057 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SCN7AQ01118 AL139384.1-201ENST00000612143 3047 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 AC092850.2-201ENST00000623821 2697 ntBASIC18.66■□□□□ 0.58
SCN7AQ01118 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN7AQ01118 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN7AQ01118 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN7AQ01118 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 KRT8P31-201ENST00000504812 1408 ntBASIC18.65■□□□□ 0.58
SCN7AQ01118 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN7AQ01118 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN7AQ01118 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN7AQ01118 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN7AQ01118 RPL18AP3-201ENST00000462885 528 ntBASIC18.65■□□□□ 0.58
SCN7AQ01118 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN7AQ01118 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.65■□□□□ 0.58
SCN7AQ01118 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SCN7AQ01118 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN7AQ01118 AC092299.1-201ENST00000632679 757 ntBASIC18.65■□□□□ 0.58
SCN7AQ01118 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 KRT8P28-201ENST00000433288 1390 ntBASIC18.65■□□□□ 0.58
SCN7AQ01118 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SCN7AQ01118 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN7AQ01118 AC144522.1-201ENST00000625111 1658 ntBASIC18.65■□□□□ 0.58
SCN7AQ01118 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN7AQ01118 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN7AQ01118 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.64■□□□□ 0.58
SCN7AQ01118 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.64■□□□□ 0.58
SCN7AQ01118 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.64■□□□□ 0.58
SCN7AQ01118 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SCN7AQ01118 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN7AQ01118 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN7AQ01118 XBP1P1-201ENST00000436573 652 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 AP000358.1-201ENST00000456260 156 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN7AQ01118 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms