Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 RN7SL219P-201ENST00000582872 296 ntBASIC17.67■□□□□ 0.42
CHMP4BP1P59074 AC233724.13-201ENST00000598383 410 ntBASIC17.67■□□□□ 0.42
CHMP4BP1P59074 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.67■□□□□ 0.42
CHMP4BP1P59074 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 PDIA3P1-201ENST00000471856 1510 ntBASIC17.67■□□□□ 0.42
CHMP4BP1P59074 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 USP32P1-208ENST00000506594 1164 ntBASIC17.66■□□□□ 0.42
CHMP4BP1P59074 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 RPSAP52-203ENST00000622976 1023 ntBASIC17.66■□□□□ 0.42
CHMP4BP1P59074 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP4BP1P59074 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 AL009178.2-201ENST00000597278 2719 ntBASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 MIR600HG-201ENST00000449175 5984 ntBASIC17.65■□□□□ 0.42
CHMP4BP1P59074 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 FAM86MP-201ENST00000340703 885 ntBASIC17.65■□□□□ 0.42
CHMP4BP1P59074 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 AC134915.1-201ENST00000426461 574 ntBASIC17.65■□□□□ 0.42
CHMP4BP1P59074 KLF2P4-201ENST00000451959 1225 ntBASIC17.65■□□□□ 0.42
CHMP4BP1P59074 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4BP1P59074 REXO1L1P-202ENST00000608646 1974 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms