Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MIR4259-201ENST00000584466 101 ntBASIC16.21■□□□□ 0.19
GRIK1P39086 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.21■□□□□ 0.19
GRIK1P39086 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.21■□□□□ 0.19
GRIK1P39086 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.21■□□□□ 0.19
GRIK1P39086 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.21■□□□□ 0.19
GRIK1P39086 AL354718.3-201ENST00000616414 581 ntBASIC16.21■□□□□ 0.19
GRIK1P39086 CR382287.1-201ENST00000623954 586 ntBASIC16.21■□□□□ 0.19
GRIK1P39086 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.21■□□□□ 0.19
GRIK1P39086 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GRIK1P39086 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.21■□□□□ 0.19
GRIK1P39086 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GRIK1P39086 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GRIK1P39086 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GRIK1P39086 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GRIK1P39086 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
GRIK1P39086 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
GRIK1P39086 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
GRIK1P39086 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GRIK1P39086 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GRIK1P39086 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GRIK1P39086 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
GRIK1P39086 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GRIK1P39086 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GRIK1P39086 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 CICP11-201ENST00000434745 2827 ntBASIC16.2■□□□□ 0.18
GRIK1P39086 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.2■□□□□ 0.18
GRIK1P39086 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
GRIK1P39086 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.2■□□□□ 0.18
GRIK1P39086 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.2■□□□□ 0.18
GRIK1P39086 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.2■□□□□ 0.18
GRIK1P39086 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 AC244669.2-201ENST00000612320 853 ntBASIC16.2■□□□□ 0.18
GRIK1P39086 AC145423.3-201ENST00000615987 467 ntBASIC16.2■□□□□ 0.18
GRIK1P39086 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.2■□□□□ 0.18
GRIK1P39086 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GRIK1P39086 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.2■□□□□ 0.18
GRIK1P39086 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.19■□□□□ 0.18
GRIK1P39086 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 AC132872.4-202ENST00000622924 2756 ntBASIC16.19■□□□□ 0.18
GRIK1P39086 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.19■□□□□ 0.18
GRIK1P39086 AL645937.2-201ENST00000396808 931 ntBASIC16.19■□□□□ 0.18
GRIK1P39086 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.19■□□□□ 0.18
GRIK1P39086 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.19■□□□□ 0.18
GRIK1P39086 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.19■□□□□ 0.18
GRIK1P39086 AC119751.2-201ENST00000504529 210 ntBASIC16.19■□□□□ 0.18
GRIK1P39086 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.19■□□□□ 0.18
GRIK1P39086 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GRIK1P39086 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GRIK1P39086 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms