Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CTNNA1P35221 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.33■□□□□ 0.2
CTNNA1P35221 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CTNNA1P35221 MTND6P24-201ENST00000440466 518 ntBASIC16.33■□□□□ 0.2
CTNNA1P35221 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.33■□□□□ 0.2
CTNNA1P35221 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.33■□□□□ 0.2
CTNNA1P35221 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CTNNA1P35221 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNNA1P35221 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CTNNA1P35221 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNNA1P35221 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 AC005840.4-201ENST00000541242 2494 ntBASIC16.33■□□□□ 0.2
CTNNA1P35221 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNNA1P35221 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNNA1P35221 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CTNNA1P35221 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.32■□□□□ 0.2
CTNNA1P35221 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CTNNA1P35221 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CTNNA1P35221 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 ACE3P-201ENST00000423435 1973 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 FAM8A3P-201ENST00000427218 844 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.32■□□□□ 0.2
CTNNA1P35221 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.32■□□□□ 0.2
CTNNA1P35221 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 SLED1-202ENST00000512051 380 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.32■□□□□ 0.2
CTNNA1P35221 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 AL079307.3-201ENST00000556114 283 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.32■□□□□ 0.2
CTNNA1P35221 ST20-AS1-201ENST00000560255 4223 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.32■□□□□ 0.2
CTNNA1P35221 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 AC011467.4-201ENST00000594891 528 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.32■□□□□ 0.2
CTNNA1P35221 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.32■□□□□ 0.2
CTNNA1P35221 AC004835.2-201ENST00000603762 682 ntBASIC16.32■□□□□ 0.2
CTNNA1P35221 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.32■□□□□ 0.2
CTNNA1P35221 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTNNA1P35221 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CTNNA1P35221 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms