Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.96□□□□□ -0.17
GDF1P27539 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.96□□□□□ -0.17
GDF1P27539 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.96□□□□□ -0.17
GDF1P27539 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.96□□□□□ -0.17
GDF1P27539 NUS1P3-201ENST00000423502 862 ntBASIC13.96□□□□□ -0.17
GDF1P27539 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.96□□□□□ -0.17
GDF1P27539 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 C2orf27AP3-201ENST00000434123 579 ntBASIC13.96□□□□□ -0.17
GDF1P27539 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.96□□□□□ -0.17
GDF1P27539 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.96□□□□□ -0.17
GDF1P27539 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
GDF1P27539 AL354718.3-201ENST00000616414 581 ntBASIC13.96□□□□□ -0.17
GDF1P27539 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 CR382287.1-201ENST00000623954 586 ntBASIC13.96□□□□□ -0.17
GDF1P27539 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
GDF1P27539 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.96□□□□□ -0.17
GDF1P27539 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.96□□□□□ -0.18
GDF1P27539 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GDF1P27539 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.96□□□□□ -0.18
GDF1P27539 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GDF1P27539 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.96□□□□□ -0.18
GDF1P27539 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GDF1P27539 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GDF1P27539 AC090616.6-203ENST00000579186 1945 ntBASIC13.96□□□□□ -0.18
GDF1P27539 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.96□□□□□ -0.18
GDF1P27539 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GDF1P27539 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 PDIA3P1-201ENST00000471856 1510 ntBASIC13.95□□□□□ -0.18
GDF1P27539 AC087481.3-201ENST00000602886 1894 ntBASIC13.95□□□□□ -0.18
GDF1P27539 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 KRT8P35-201ENST00000483942 1338 ntBASIC13.95□□□□□ -0.18
GDF1P27539 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.95□□□□□ -0.18
GDF1P27539 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.95□□□□□ -0.18
GDF1P27539 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GDF1P27539 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 RNU1-114P-201ENST00000365297 166 ntBASIC13.95□□□□□ -0.18
GDF1P27539 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.95□□□□□ -0.18
GDF1P27539 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
GDF1P27539 KRT223P-202ENST00000449164 1292 ntBASIC13.95□□□□□ -0.18
GDF1P27539 KLF2P4-201ENST00000451959 1225 ntBASIC13.95□□□□□ -0.18
GDF1P27539 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.95□□□□□ -0.18
GDF1P27539 CTBP2P5-201ENST00000454986 1264 ntBASIC13.95□□□□□ -0.18
GDF1P27539 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
GDF1P27539 AP005482.1-201ENST00000563722 1273 ntBASIC13.95□□□□□ -0.18
GDF1P27539 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.95□□□□□ -0.18
GDF1P27539 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.95□□□□□ -0.18
GDF1P27539 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.95□□□□□ -0.18
GDF1P27539 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.95□□□□□ -0.18
GDF1P27539 MIR6752-201ENST00000618442 71 ntBASIC13.95□□□□□ -0.18
GDF1P27539 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
GDF1P27539 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GDF1P27539 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.95□□□□□ -0.18
GDF1P27539 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.95□□□□□ -0.18
GDF1P27539 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDF1P27539 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.94□□□□□ -0.18
GDF1P27539 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDF1P27539 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GDF1P27539 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms