Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.75■□□□□ 0.91
ATF3P18847 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.75■□□□□ 0.91
ATF3P18847 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ATF3P18847 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.75■□□□□ 0.91
ATF3P18847 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.75■□□□□ 0.91
ATF3P18847 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.75■□□□□ 0.91
ATF3P18847 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC20.75■□□□□ 0.91
ATF3P18847 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 SIGLEC18P-201ENST00000602271 909 ntBASIC20.75■□□□□ 0.91
ATF3P18847 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ATF3P18847 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATF3P18847 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.75■□□□□ 0.91
ATF3P18847 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 AC015909.3-201ENST00000572855 1794 ntBASIC20.74■□□□□ 0.91
ATF3P18847 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 AL157414.3-201ENST00000624276 1954 ntBASIC20.74■□□□□ 0.91
ATF3P18847 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 AC107464.3-201ENST00000609172 737 ntBASIC20.74■□□□□ 0.91
ATF3P18847 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATF3P18847 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.74■□□□□ 0.91
ATF3P18847 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
ATF3P18847 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.74■□□□□ 0.91
ATF3P18847 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 AL360270.3-201ENST00000609118 1348 ntBASIC20.74■□□□□ 0.91
ATF3P18847 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
ATF3P18847 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATF3P18847 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATF3P18847 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATF3P18847 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATF3P18847 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.73■□□□□ 0.91
ATF3P18847 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.73■□□□□ 0.91
ATF3P18847 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
ATF3P18847 MIR557-201ENST00000385239 98 ntBASIC20.73■□□□□ 0.91
ATF3P18847 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.73■□□□□ 0.91
ATF3P18847 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.73■□□□□ 0.91
ATF3P18847 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC20.73■□□□□ 0.91
ATF3P18847 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.73■□□□□ 0.91
ATF3P18847 FLJ38576-201ENST00000623820 2459 ntBASIC20.73■□□□□ 0.91
ATF3P18847 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATF3P18847 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 KRT18P9-201ENST00000604826 1300 ntBASIC20.73■□□□□ 0.91
ATF3P18847 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATF3P18847 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATF3P18847 AC069224.1-201ENST00000566372 1715 ntBASIC20.73■□□□□ 0.91
ATF3P18847 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF3P18847 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATF3P18847 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms