Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CHRNA1P02708 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.58■□□□□ 0.24
CHRNA1P02708 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRNA1P02708 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA1P02708 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHRNA1P02708 CHMP4BP1-201ENST00000556017 588 ntBASIC16.58■□□□□ 0.24
CHRNA1P02708 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA1P02708 AC138649.2-201ENST00000615886 705 ntBASIC16.58■□□□□ 0.24
CHRNA1P02708 AC022748.3-201ENST00000621828 275 ntBASIC16.58■□□□□ 0.24
CHRNA1P02708 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 AC138627.1-207ENST00000641560 1006 ntBASIC16.58■□□□□ 0.24
CHRNA1P02708 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRNA1P02708 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA1P02708 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.58■□□□□ 0.24
CHRNA1P02708 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA1P02708 AC092850.2-201ENST00000623821 2697 ntBASIC16.57■□□□□ 0.24
CHRNA1P02708 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 AC090616.6-203ENST00000579186 1945 ntBASIC16.57■□□□□ 0.24
CHRNA1P02708 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA1P02708 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 AP000593.2-201ENST00000542775 1433 ntBASIC16.57■□□□□ 0.24
CHRNA1P02708 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHRNA1P02708 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.57■□□□□ 0.24
CHRNA1P02708 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA1P02708 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.57■□□□□ 0.24
CHRNA1P02708 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
CHRNA1P02708 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.57■□□□□ 0.24
CHRNA1P02708 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CHRNA1P02708 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 AL162727.3-201ENST00000635661 2787 ntBASIC16.57■□□□□ 0.24
CHRNA1P02708 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
CHRNA1P02708 AL391005.1-201ENST00000623953 2435 ntBASIC16.57■□□□□ 0.24
CHRNA1P02708 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 AL359258.3-201ENST00000622910 2331 ntBASIC16.57■□□□□ 0.24
CHRNA1P02708 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.57■□□□□ 0.24
CHRNA1P02708 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA1P02708 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.57■□□□□ 0.24
CHRNA1P02708 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CHRNA1P02708 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.57■□□□□ 0.24
CHRNA1P02708 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHRNA1P02708 INE2-201ENST00000630399 1874 ntBASIC16.56■□□□□ 0.24
CHRNA1P02708 CICP6-201ENST00000457191 2729 ntBASIC16.56■□□□□ 0.24
CHRNA1P02708 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CHRNA1P02708 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CHRNA1P02708 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CHRNA1P02708 TUBBP5-203ENST00000508529 1334 ntBASIC16.56■□□□□ 0.24
CHRNA1P02708 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA1P02708 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 AC092506.1-202ENST00000401022 528 ntBASIC16.56■□□□□ 0.24
CHRNA1P02708 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 SPTLC1P5-201ENST00000450718 252 ntBASIC16.56■□□□□ 0.24
CHRNA1P02708 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.56■□□□□ 0.24
CHRNA1P02708 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA1P02708 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA1P02708 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.56■□□□□ 0.24
CHRNA1P02708 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.56■□□□□ 0.24
CHRNA1P02708 AL137783.1-201ENST00000623494 1896 ntBASIC16.56■□□□□ 0.24
CHRNA1P02708 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA1P02708 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms