Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC22.49■■□□□ 1.19
RAPGEF3O95398 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.49■■□□□ 1.19
RAPGEF3O95398 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC22.49■■□□□ 1.19
RAPGEF3O95398 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC22.49■■□□□ 1.19
RAPGEF3O95398 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAPGEF3O95398 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC22.49■■□□□ 1.19
RAPGEF3O95398 MRPL37P1-201ENST00000592451 1337 ntBASIC22.49■■□□□ 1.19
RAPGEF3O95398 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 BCL2-203ENST00000589955 5011 ntBASIC22.48■■□□□ 1.19
RAPGEF3O95398 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 HLA-DQB1-202ENST00000399079 1501 ntBASIC22.48■■□□□ 1.19
RAPGEF3O95398 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 GCSHP3-201ENST00000431120 391 ntBASIC22.48■■□□□ 1.19
RAPGEF3O95398 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 MIR3188-201ENST00000583494 85 ntBASIC22.48■■□□□ 1.19
RAPGEF3O95398 DBP-202ENST00000593500 712 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 AL451007.2-201ENST00000632004 563 ntBASIC22.48■■□□□ 1.19
RAPGEF3O95398 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 PES1-204ENST00000402284 2144 ntTSL 5 BASIC22.48■■□□□ 1.19
RAPGEF3O95398 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPGEF3O95398 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 HLA-DMA-203ENST00000395305 777 ntBASIC22.47■■□□□ 1.19
RAPGEF3O95398 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 AGGF1P2-201ENST00000426656 2106 ntBASIC22.47■■□□□ 1.19
RAPGEF3O95398 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 MIR4472-1-201ENST00000584349 80 ntBASIC22.47■■□□□ 1.19
RAPGEF3O95398 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
RAPGEF3O95398 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPGEF3O95398 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
RAPGEF3O95398 COX20P1-201ENST00000366529 357 ntBASIC22.46■■□□□ 1.19
RAPGEF3O95398 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC22.46■■□□□ 1.19
RAPGEF3O95398 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC22.46■■□□□ 1.19
RAPGEF3O95398 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RAPGEF3O95398 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RAPGEF3O95398 AC092364.2-201ENST00000596710 2692 ntBASIC22.46■■□□□ 1.19
RAPGEF3O95398 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 ZBTB45P1-201ENST00000452761 1456 ntBASIC22.46■■□□□ 1.19
RAPGEF3O95398 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAPGEF3O95398 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC22.46■■□□□ 1.19
RAPGEF3O95398 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
RAPGEF3O95398 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
RAPGEF3O95398 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAPGEF3O95398 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAPGEF3O95398 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAPGEF3O95398 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RAPGEF3O95398 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
RAPGEF3O95398 RNA5SP359-201ENST00000364838 113 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms