Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 AL138799.1-201ENST00000448213 1675 ntBASIC16.27■□□□□ 0.19
RTN3O95197 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.27■□□□□ 0.19
RTN3O95197 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.27■□□□□ 0.19
RTN3O95197 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.27■□□□□ 0.19
RTN3O95197 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTN3O95197 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 AC079776.1-201ENST00000401540 1152 ntBASIC16.26■□□□□ 0.19
RTN3O95197 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 ATP5G2P4-201ENST00000442175 420 ntBASIC16.26■□□□□ 0.19
RTN3O95197 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.26■□□□□ 0.19
RTN3O95197 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.26■□□□□ 0.19
RTN3O95197 IGHV3-71-201ENST00000523324 359 ntBASIC16.26■□□□□ 0.19
RTN3O95197 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RTN3O95197 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.26■□□□□ 0.19
RTN3O95197 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.26■□□□□ 0.19
RTN3O95197 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 AL022328.1-201ENST00000610050 478 ntBASIC16.26■□□□□ 0.19
RTN3O95197 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 AC006058.4-201ENST00000624016 1670 ntBASIC16.26■□□□□ 0.19
RTN3O95197 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.26■□□□□ 0.19
RTN3O95197 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTN3O95197 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.26■□□□□ 0.19
RTN3O95197 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 AC092127.1-201ENST00000567093 3455 ntBASIC16.25■□□□□ 0.19
RTN3O95197 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN3O95197 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN3O95197 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RTN3O95197 AC005229.1-201ENST00000392885 409 ntBASIC16.25■□□□□ 0.19
RTN3O95197 BOLA2P3-201ENST00000404566 256 ntBASIC16.25■□□□□ 0.19
RTN3O95197 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN3O95197 BAATP1-201ENST00000412284 1225 ntBASIC16.25■□□□□ 0.19
RTN3O95197 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.25■□□□□ 0.19
RTN3O95197 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 AC234783.1-201ENST00000441761 496 ntBASIC16.25■□□□□ 0.19
RTN3O95197 AL355864.2-201ENST00000447420 863 ntBASIC16.25■□□□□ 0.19
RTN3O95197 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN3O95197 AC093433.1-201ENST00000458048 571 ntBASIC16.25■□□□□ 0.19
RTN3O95197 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 AP001582.1-201ENST00000525856 295 ntBASIC16.25■□□□□ 0.19
RTN3O95197 HILS1-202ENST00000545329 423 ntBASIC16.25■□□□□ 0.19
RTN3O95197 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.25■□□□□ 0.19
RTN3O95197 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 AL359881.2-201ENST00000602973 570 ntBASIC16.25■□□□□ 0.19
RTN3O95197 AC017083.2-201ENST00000608069 979 ntBASIC16.25■□□□□ 0.19
RTN3O95197 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.25■□□□□ 0.19
RTN3O95197 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms