Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.43□□□□□ -0.26
UPK1BO75841 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.43□□□□□ -0.26
UPK1BO75841 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UPK1BO75841 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.43□□□□□ -0.26
UPK1BO75841 AC011558.1-201ENST00000623459 338 ntBASIC13.43□□□□□ -0.26
UPK1BO75841 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UPK1BO75841 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UPK1BO75841 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UPK1BO75841 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 AC084364.1-201ENST00000551967 1556 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
UPK1BO75841 AL691432.1-201ENST00000596308 1422 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 RNU1-129P-201ENST00000384064 167 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 PTCHD3P3-201ENST00000403073 906 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
UPK1BO75841 ABCD1P5-201ENST00000445663 754 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 AC096582.2-201ENST00000510860 516 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
UPK1BO75841 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 AL355075.4-201ENST00000554988 638 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.42□□□□□ -0.26
UPK1BO75841 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 U1.21-201ENST00000580816 167 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.42□□□□□ -0.26
UPK1BO75841 HYMAI.1-201ENST00000620949 238 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.42□□□□□ -0.26
UPK1BO75841 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 TCAM1P-207ENST00000485295 1537 ntBASIC13.42□□□□□ -0.26
UPK1BO75841 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
UPK1BO75841 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UPK1BO75841 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.42□□□□□ -0.26
UPK1BO75841 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UPK1BO75841 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms