Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
EXTL3O43909 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EXTL3O43909 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
EXTL3O43909 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EXTL3O43909 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.67■□□□□ 0.26
EXTL3O43909 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
EXTL3O43909 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EXTL3O43909 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EXTL3O43909 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EXTL3O43909 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.67■□□□□ 0.26
EXTL3O43909 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
EXTL3O43909 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.67■□□□□ 0.26
EXTL3O43909 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 AC068587.6-202ENST00000641839 5619 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.66■□□□□ 0.26
EXTL3O43909 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.66■□□□□ 0.26
EXTL3O43909 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 AC114812.1-204ENST00000449669 728 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 AC007389.4-201ENST00000454674 793 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 GIMAP3P-201ENST00000495150 836 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.66■□□□□ 0.26
EXTL3O43909 MIR5189-201ENST00000577370 114 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 AC132938.2-201ENST00000579188 680 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 AL591163.1-201ENST00000641757 987 ntBASIC16.66■□□□□ 0.26
EXTL3O43909 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.66■□□□□ 0.26
EXTL3O43909 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
EXTL3O43909 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EXTL3O43909 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.65■□□□□ 0.26
EXTL3O43909 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EXTL3O43909 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EXTL3O43909 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 RNU1-114P-201ENST00000365297 166 ntBASIC16.65■□□□□ 0.26
EXTL3O43909 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.65■□□□□ 0.26
EXTL3O43909 AL139094.1-201ENST00000405549 1188 ntBASIC16.65■□□□□ 0.26
EXTL3O43909 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.65■□□□□ 0.26
EXTL3O43909 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.65■□□□□ 0.26
EXTL3O43909 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.65■□□□□ 0.26
EXTL3O43909 HLA-K-203ENST00000430151 1046 ntBASIC16.65■□□□□ 0.26
EXTL3O43909 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.65■□□□□ 0.26
EXTL3O43909 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.65■□□□□ 0.26
EXTL3O43909 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EXTL3O43909 AC022137.2-201ENST00000503482 481 ntBASIC16.65■□□□□ 0.26
EXTL3O43909 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EXTL3O43909 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EXTL3O43909 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.65■□□□□ 0.26
EXTL3O43909 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.65■□□□□ 0.26
EXTL3O43909 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
EXTL3O43909 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms