Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
APAF1O14727 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.22■□□□□ 0.83
APAF1O14727 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APAF1O14727 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APAF1O14727 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.21■□□□□ 0.83
APAF1O14727 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 AP006294.1-201ENST00000415407 339 ntBASIC20.21■□□□□ 0.83
APAF1O14727 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
APAF1O14727 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 RN7SL837P-201ENST00000463010 287 ntBASIC20.21■□□□□ 0.83
APAF1O14727 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 ENPP7P5-201ENST00000541031 1031 ntBASIC20.21■□□□□ 0.83
APAF1O14727 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
APAF1O14727 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 AC105233.6-201ENST00000642093 218 ntBASIC20.21■□□□□ 0.83
APAF1O14727 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.21■□□□□ 0.83
APAF1O14727 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APAF1O14727 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
APAF1O14727 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.2■□□□□ 0.83
APAF1O14727 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.2■□□□□ 0.83
APAF1O14727 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 AJ011931.1-201ENST00000618749 2492 ntBASIC20.2■□□□□ 0.82
APAF1O14727 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.2■□□□□ 0.82
APAF1O14727 RNU1-114P-201ENST00000365297 166 ntBASIC20.2■□□□□ 0.82
APAF1O14727 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.2■□□□□ 0.82
APAF1O14727 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.2■□□□□ 0.82
APAF1O14727 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.2■□□□□ 0.82
APAF1O14727 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.2■□□□□ 0.82
APAF1O14727 AC027307.3-201ENST00000594262 1100 ntBASIC20.2■□□□□ 0.82
APAF1O14727 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.2■□□□□ 0.82
APAF1O14727 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.2■□□□□ 0.82
APAF1O14727 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.2■□□□□ 0.82
APAF1O14727 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.2■□□□□ 0.82
APAF1O14727 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
APAF1O14727 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
APAF1O14727 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
APAF1O14727 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
APAF1O14727 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 AC098614.1-201ENST00000368528 745 ntBASIC20.19■□□□□ 0.82
APAF1O14727 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
APAF1O14727 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.19■□□□□ 0.82
APAF1O14727 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.19■□□□□ 0.82
APAF1O14727 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.19■□□□□ 0.82
APAF1O14727 AL162726.2-201ENST00000438986 1017 ntBASIC20.19■□□□□ 0.82
APAF1O14727 INE1-201ENST00000456273 945 ntBASIC20.19■□□□□ 0.82
APAF1O14727 AC093433.1-201ENST00000458048 571 ntBASIC20.19■□□□□ 0.82
APAF1O14727 RN7SL752P-201ENST00000463779 287 ntBASIC20.19■□□□□ 0.82
APAF1O14727 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
APAF1O14727 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
APAF1O14727 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
APAF1O14727 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
APAF1O14727 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
APAF1O14727 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.19■□□□□ 0.82
APAF1O14727 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms