Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 GRK6P1-201ENST00000400595 1711 ntBASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 SPDYE18-201ENST00000510091 1050 ntBASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 AC025048.6-201ENST00000634326 1161 ntBASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX49Q9Y6V7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 CETN4P-206ENST00000642099 2168 ntBASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AC093724.1-201ENST00000448659 1027 ntBASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AL079307.3-201ENST00000556114 283 ntBASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX49Q9Y6V7 AC005912.2-201ENST00000619492 2400 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms