Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 OR6D1P-202ENST00000641007 5290 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 FAM90A2P-201ENST00000511144 1395 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 FAM90A25P-201ENST00000528404 1395 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AC008741.2-201ENST00000612792 3115 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AL158070.2-201ENST00000623713 1621 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 LINC00554-201ENST00000564841 3011 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AC239868.1-201ENST00000369385 493 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 FO393412.1-201ENST00000619841 382 ntBASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZC3H4Q9UPT8 AP000593.2-201ENST00000542775 1433 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 PIN4P1-201ENST00000451079 396 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 RN7SL67P-201ENST00000492147 296 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 HLA-J-204ENST00000495278 958 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AL136301.1-201ENST00000615830 422 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AC148477.9-201ENST00000623974 539 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 AL513477.1-201ENST00000602865 2407 ntBASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
ZC3H4Q9UPT8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms