Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AC103564.2-201ENST00000432853 1299 ntBASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 ABCD1P5-201ENST00000445663 754 ntBASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBQLN2Q9UHD9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC019294.4-201ENST00000561777 2905 ntBASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC073592.5-201ENST00000624854 528 ntBASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
UBQLN2Q9UHD9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBQLN2Q9UHD9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms