Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KCMF1Q9P0J7 AC148477.4-201ENST00000613430 1793 ntBASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AC023024.2-201ENST00000623561 1993 ntBASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AC104457.1-201ENST00000401024 814 ntBASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 MYCLP2-201ENST00000449268 967 ntBASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AC092552.1-201ENST00000547243 906 ntBASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AC025048.6-201ENST00000634326 1161 ntBASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
KCMF1Q9P0J7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 GHSR-202ENST00000427970 912 ntBASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 VDAC1P7-201ENST00000462417 847 ntBASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 AC104596.2-201ENST00000512793 793 ntBASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 TP53TG3HP-202ENST00000569755 579 ntBASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCMF1Q9P0J7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms