Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC244107.1-201ENST00000442033 332 ntBASIC15.68■□□□□ 0.1
RTP4Q96DX8 AL589987.1-201ENST00000453380 819 ntBASIC15.68■□□□□ 0.1
RTP4Q96DX8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC008738.7-201ENST00000609744 511 ntBASIC15.68■□□□□ 0.1
RTP4Q96DX8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC009118.2-201ENST00000613275 655 ntBASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC004840.1-201ENST00000636359 365 ntBASIC15.68■□□□□ 0.1
RTP4Q96DX8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 AC022144.1-201ENST00000602255 1580 ntBASIC15.67■□□□□ 0.1
RTP4Q96DX8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 CRB3P1-201ENST00000449338 276 ntBASIC15.67■□□□□ 0.1
RTP4Q96DX8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 DRD5P1-201ENST00000456605 1438 ntBASIC15.67■□□□□ 0.1
RTP4Q96DX8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
RTP4Q96DX8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTP4Q96DX8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTP4Q96DX8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 AC026410.3-201ENST00000514280 936 ntBASIC15.66■□□□□ 0.1
RTP4Q96DX8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RTP4Q96DX8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms