Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RBM8B-201ENST00000555532 525 ntBASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 AC007881.3-201ENST00000608897 607 ntBASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 AL008718.2-201ENST00000609206 1313 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 AC020910.5-201ENST00000623668 1865 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 AL512430.1-201ENST00000392575 860 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 AC012441.2-201ENST00000444843 739 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 MIR3677-201ENST00000578964 60 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 RPL17P45-201ENST00000586289 509 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 MEG3_2.1-201ENST00000611456 105 ntBASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM43Q96BQ3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM43Q96BQ3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 AC136759.1-202ENST00000530858 2194 ntBASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 AC069224.1-201ENST00000566372 1715 ntBASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 AC026320.2-201ENST00000434379 478 ntBASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 AC138696.2-201ENST00000607376 223 ntBASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 KRT8P21-201ENST00000430398 1491 ntBASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM43Q96BQ3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms