Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SCARNA2-201ENST00000458748 420 ntBASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 AC012508.2-201ENST00000567613 1472 ntBASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
MBD3L1Q8WWY6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 AC015909.5-201ENST00000624336 2266 ntBASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 AL513480.1-201ENST00000451731 511 ntBASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 AC098859.1-201ENST00000502915 1238 ntBASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms