Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 DGCR5-201ENST00000399539 862 ntBASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 MYCLP2-201ENST00000449268 967 ntBASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 AL596325.1-201ENST00000563991 1082 ntBASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 RRP7BP-205ENST00000566851 833 ntBASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 AC093726.1-201ENST00000608064 963 ntBASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMARCC2Q8TAQ2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 AC106881.1-201ENST00000605849 3329 ntBASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 AC104596.2-201ENST00000512793 793 ntBASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 WASH4P-201ENST00000564273 1246 ntBASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 AC036164.1-201ENST00000570544 333 ntBASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
SMARCC2Q8TAQ2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 REXO1L4P-201ENST00000605109 1937 ntBASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SMARCC2Q8TAQ2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms