Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 AC068418.2-201ENST00000577309 3703 ntBASIC16.33■□□□□ 0.21
TMEM35BQ8NCS4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM35BQ8NCS4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM35BQ8NCS4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TMEM35BQ8NCS4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TMEM35BQ8NCS4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM35BQ8NCS4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 RPL13AP25-201ENST00000484130 612 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AC004066.1-201ENST00000502488 802 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SERBP1P5-201ENST00000510079 1181 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AL049840.4-201ENST00000602422 811 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AL096865.1-201ENST00000606796 927 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SLC7A15P-201ENST00000424028 1363 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 AL161772.1-201ENST00000610494 4412 ntBASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
TMEM35BQ8NCS4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 DRD5P1-201ENST00000456605 1438 ntBASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AP000845.1-201ENST00000581677 2131 ntBASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM35BQ8NCS4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35BQ8NCS4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms