Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AC006449.5-201ENST00000610658 2098 ntBASIC16.62■□□□□ 0.25
HERC6Q8IVU3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 MIR3907-201ENST00000579424 151 ntBASIC16.62■□□□□ 0.25
HERC6Q8IVU3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 AC091544.8-201ENST00000619490 361 ntBASIC16.62■□□□□ 0.25
HERC6Q8IVU3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.61■□□□□ 0.25
HERC6Q8IVU3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 RN7SL774P-201ENST00000577467 290 ntBASIC16.61■□□□□ 0.25
HERC6Q8IVU3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AL353726.2-201ENST00000623259 884 ntBASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AC079336.7-201ENST00000623428 1078 ntBASIC16.61■□□□□ 0.25
HERC6Q8IVU3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AC092978.1-202ENST00000637590 1327 ntBASIC16.61■□□□□ 0.25
HERC6Q8IVU3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HERC6Q8IVU3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.6■□□□□ 0.25
HERC6Q8IVU3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms