Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 AC090502.4-201ENST00000551714 1386 ntBASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTF1AQ7RTS3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AC244250.3-201ENST00000620749 366 ntBASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.33■□□□□ 0.68
PTF1AQ7RTS3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 LINC00634-202ENST00000505157 222 ntBASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTF1AQ7RTS3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AC144522.1-201ENST00000625111 1658 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AL807761.2-201ENST00000422849 729 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AC004837.1-201ENST00000446267 564 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 CHCHD2P9-201ENST00000461726 456 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AC006122.1-201ENST00000493323 440 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AC027237.1-201ENST00000560942 655 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 AP001184.1-201ENST00000637936 376 ntBASIC19.31■□□□□ 0.68
PTF1AQ7RTS3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms