Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AC138466.3-201ENST00000619983 221 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AP001002.3-201ENST00000623482 206 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 NKAIN1P1-201ENST00000435754 582 ntBASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 AC004898.1-201ENST00000451057 766 ntBASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 AKR7A2P1-201ENST00000460134 915 ntBASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 MIR4783-201ENST00000580343 82 ntBASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 AL137783.1-201ENST00000623494 1896 ntBASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHROOM1Q2M3G4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 AC005077.2-201ENST00000449786 690 ntBASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 AC044849.1-201ENST00000519737 1188 ntBASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 PKD1P1-201ENST00000458669 6805 ntBASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.8■□□□□ 0.44
SHROOM1Q2M3G4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms