Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SCN1BQ07699 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 AC007967.2-201ENST00000432613 625 ntBASIC13.84□□□□□ -0.19
SCN1BQ07699 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 RNA5SP419-201ENST00000515908 135 ntBASIC13.84□□□□□ -0.19
SCN1BQ07699 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 AC096734.2-201ENST00000562054 433 ntBASIC13.84□□□□□ -0.19
SCN1BQ07699 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 AC018845.2-201ENST00000568326 409 ntBASIC13.84□□□□□ -0.19
SCN1BQ07699 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN1BQ07699 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.84□□□□□ -0.19
SCN1BQ07699 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN1BQ07699 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 AL731571.1-201ENST00000617058 5428 ntBASIC13.84□□□□□ -0.19
SCN1BQ07699 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SCN1BQ07699 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN1BQ07699 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN1BQ07699 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SCN1BQ07699 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN1BQ07699 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SCN1BQ07699 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SCN1BQ07699 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN1BQ07699 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.83□□□□□ -0.19
SCN1BQ07699 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SCN1BQ07699 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.83□□□□□ -0.19
SCN1BQ07699 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN1BQ07699 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 WASH6P-202ENST00000359512 1437 ntBASIC13.83□□□□□ -0.2
SCN1BQ07699 AC025580.3-201ENST00000617932 1424 ntBASIC13.83□□□□□ -0.2
SCN1BQ07699 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SCN1BQ07699 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
SCN1BQ07699 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SCN1BQ07699 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SCN1BQ07699 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN1BQ07699 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN1BQ07699 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SCN1BQ07699 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN1BQ07699 AC004877.2-201ENST00000623941 599 ntBASIC13.83□□□□□ -0.2
SCN1BQ07699 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SCN1BQ07699 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN1BQ07699 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SCN1BQ07699 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.83□□□□□ -0.2
SCN1BQ07699 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SCN1BQ07699 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN1BQ07699 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms