Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MIR574-201ENST00000385209 96 ntBASIC11.9□□□□□ -0.5
HIST1H1AQ02539 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MKNK2P1-201ENST00000437526 628 ntBASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AL450472.2-201ENST00000603663 1156 ntBASIC11.9□□□□□ -0.5
HIST1H1AQ02539 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
HIST1H1AQ02539 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CYP4F24P-201ENST00000586049 1580 ntBASIC11.89□□□□□ -0.51
HIST1H1AQ02539 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 MIR346-201ENST00000362234 95 ntBASIC11.89□□□□□ -0.51
HIST1H1AQ02539 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 AC069335.1-201ENST00000489972 472 ntBASIC11.89□□□□□ -0.51
HIST1H1AQ02539 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.89□□□□□ -0.51
HIST1H1AQ02539 PGAM5P1-201ENST00000518923 814 ntBASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms