Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 DPY19L2P5-201ENST00000456300 331 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 AC113347.2-201ENST00000512350 279 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 DERL2-206ENST00000572834 589 ntTSL 3 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 HYMAI-201ENST00000635591 3347 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AL008718.2-201ENST00000609206 1313 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AHCYP3-201ENST00000420053 1279 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 AC114812.1-204ENST00000449669 728 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CACNA1BQ00975 RN7SL81P-201ENST00000493781 261 ntBASIC14.06□□□□□ -0.16
CACNA1BQ00975 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CACNA1BQ00975 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 AC106827.1-201ENST00000366454 431 ntBASIC14.05□□□□□ -0.16
CACNA1BQ00975 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CHMP1AP1-201ENST00000445563 662 ntBASIC14.05□□□□□ -0.16
CACNA1BQ00975 AC026412.1-206ENST00000502273 206 ntBASIC14.05□□□□□ -0.16
CACNA1BQ00975 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 SNORD3B-2-202ENST00000571722 791 ntBASIC14.05□□□□□ -0.16
CACNA1BQ00975 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CACNA1BQ00975 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
CACNA1BQ00975 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms