Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 AC074338.1-201ENST00000416825 156 ntBASIC17.69■□□□□ 0.42
CHMP4BP1P59074 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 RPL13P2-201ENST00000440687 659 ntBASIC17.69■□□□□ 0.42
CHMP4BP1P59074 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 CTBP2P5-201ENST00000454986 1264 ntBASIC17.69■□□□□ 0.42
CHMP4BP1P59074 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.69■□□□□ 0.42
CHMP4BP1P59074 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP4BP1P59074 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP4BP1P59074 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 AL162726.2-201ENST00000438986 1017 ntBASIC17.67■□□□□ 0.42
CHMP4BP1P59074 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP4BP1P59074 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms