Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC013268.4-201ENST00000637413 2228 ntBASIC14.86□□□□□ -0.03
RAB28P51157 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB28P51157 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAB28P51157 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB28P51157 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB28P51157 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RAB28P51157 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RAB28P51157 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB28P51157 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RAB28P51157 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAB28P51157 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
RAB28P51157 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.85□□□□□ -0.03
RAB28P51157 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 AC093433.1-201ENST00000458048 571 ntBASIC14.85□□□□□ -0.03
RAB28P51157 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 AC022137.2-201ENST00000503482 481 ntBASIC14.85□□□□□ -0.03
RAB28P51157 KRT18P25-201ENST00000508931 1278 ntBASIC14.85□□□□□ -0.03
RAB28P51157 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB28P51157 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB28P51157 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB28P51157 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB28P51157 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 REXO1L4P-201ENST00000605109 1937 ntBASIC14.85□□□□□ -0.03
RAB28P51157 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 MROH4P-201ENST00000431302 1578 ntBASIC14.85□□□□□ -0.03
RAB28P51157 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAB28P51157 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB28P51157 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB28P51157 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB28P51157 AC114812.1-204ENST00000449669 728 ntBASIC14.84□□□□□ -0.03
RAB28P51157 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB28P51157 AC068587.3-201ENST00000526613 355 ntBASIC14.84□□□□□ -0.03
RAB28P51157 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB28P51157 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB28P51157 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.84□□□□□ -0.03
RAB28P51157 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB28P51157 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB28P51157 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms