Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.78□□□□□ -0.2
SRP9P49458 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.78□□□□□ -0.2
SRP9P49458 AL512356.2-201ENST00000546955 174 ntBASIC13.78□□□□□ -0.2
SRP9P49458 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.78□□□□□ -0.2
SRP9P49458 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 MIR6080-201ENST00000617359 66 ntBASIC13.78□□□□□ -0.2
SRP9P49458 AL136317.3-201ENST00000618497 906 ntBASIC13.78□□□□□ -0.2
SRP9P49458 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.78□□□□□ -0.2
SRP9P49458 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRP9P49458 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SRP9P49458 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
SRP9P49458 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.77□□□□□ -0.2
SRP9P49458 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SRP9P49458 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRP9P49458 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SRP9P49458 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.77□□□□□ -0.21
SRP9P49458 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.77□□□□□ -0.21
SRP9P49458 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 GPS2P2-201ENST00000430745 888 ntBASIC13.77□□□□□ -0.21
SRP9P49458 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.77□□□□□ -0.21
SRP9P49458 METTL21AP1-201ENST00000438852 635 ntBASIC13.77□□□□□ -0.21
SRP9P49458 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 SPDYE14P-201ENST00000442619 822 ntBASIC13.77□□□□□ -0.21
SRP9P49458 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.77□□□□□ -0.21
SRP9P49458 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.77□□□□□ -0.21
SRP9P49458 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.77□□□□□ -0.21
SRP9P49458 AC061975.2-201ENST00000581722 295 ntBASIC13.77□□□□□ -0.21
SRP9P49458 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.77□□□□□ -0.21
SRP9P49458 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 AC003101.2-201ENST00000612557 442 ntBASIC13.77□□□□□ -0.21
SRP9P49458 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SRP9P49458 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.77□□□□□ -0.21
SRP9P49458 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.77□□□□□ -0.21
SRP9P49458 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.77□□□□□ -0.21
SRP9P49458 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SRP9P49458 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRP9P49458 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SRP9P49458 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 AC148477.4-201ENST00000613430 1793 ntBASIC13.76□□□□□ -0.21
SRP9P49458 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.76□□□□□ -0.21
SRP9P49458 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms