Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PDE6BP35913 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PDE6BP35913 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PDE6BP35913 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.77■□□□□ 0.6
PDE6BP35913 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.77■□□□□ 0.6
PDE6BP35913 FGFR3P1-201ENST00000449999 601 ntBASIC18.77■□□□□ 0.6
PDE6BP35913 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6BP35913 AC026434.2-201ENST00000506094 1078 ntBASIC18.77■□□□□ 0.6
PDE6BP35913 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6BP35913 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.77■□□□□ 0.6
PDE6BP35913 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6BP35913 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6BP35913 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.77■□□□□ 0.6
PDE6BP35913 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PDE6BP35913 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PDE6BP35913 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6BP35913 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.77■□□□□ 0.59
PDE6BP35913 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.77■□□□□ 0.59
PDE6BP35913 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6BP35913 AC127383.1-201ENST00000444697 1800 ntBASIC18.77■□□□□ 0.59
PDE6BP35913 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE6BP35913 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE6BP35913 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE6BP35913 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6BP35913 RPL5P21-201ENST00000404620 815 ntBASIC18.76■□□□□ 0.59
PDE6BP35913 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6BP35913 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6BP35913 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.76■□□□□ 0.59
PDE6BP35913 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
PDE6BP35913 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.76■□□□□ 0.59
PDE6BP35913 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6BP35913 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6BP35913 REXO1L5P-201ENST00000622260 2098 ntBASIC18.76■□□□□ 0.59
PDE6BP35913 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDE6BP35913 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE6BP35913 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6BP35913 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.76■□□□□ 0.59
PDE6BP35913 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PDE6BP35913 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 AC010141.1-201ENST00000411585 623 ntBASIC18.75■□□□□ 0.59
PDE6BP35913 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.75■□□□□ 0.59
PDE6BP35913 LINC02447-202ENST00000501888 2146 ntBASIC18.75■□□□□ 0.59
PDE6BP35913 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.75■□□□□ 0.59
PDE6BP35913 RN7SL736P-201ENST00000613111 269 ntBASIC18.75■□□□□ 0.59
PDE6BP35913 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6BP35913 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PDE6BP35913 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDE6BP35913 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDE6BP35913 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms