Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COPB2P35606 AC091804.1-201ENST00000486888 567 ntBASIC17.56■□□□□ 0.4
COPB2P35606 RPSAP36-202ENST00000494591 1261 ntBASIC17.56■□□□□ 0.4
COPB2P35606 AC022616.1-201ENST00000518688 554 ntBASIC17.56■□□□□ 0.4
COPB2P35606 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
COPB2P35606 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.56■□□□□ 0.4
COPB2P35606 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.56■□□□□ 0.4
COPB2P35606 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COPB2P35606 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.56■□□□□ 0.4
COPB2P35606 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
COPB2P35606 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 AL158070.2-201ENST00000623713 1621 ntBASIC17.56■□□□□ 0.4
COPB2P35606 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COPB2P35606 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.56■□□□□ 0.4
COPB2P35606 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.56■□□□□ 0.4
COPB2P35606 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.56■□□□□ 0.4
COPB2P35606 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 AC112504.1-201ENST00000623415 1841 ntBASIC17.56■□□□□ 0.4
COPB2P35606 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.56■□□□□ 0.4
COPB2P35606 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.55■□□□□ 0.4
COPB2P35606 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AC022188.1-201ENST00000620960 1664 ntBASIC17.55■□□□□ 0.4
COPB2P35606 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.55■□□□□ 0.4
COPB2P35606 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.55■□□□□ 0.4
COPB2P35606 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 CALR4P-201ENST00000431943 946 ntBASIC17.55■□□□□ 0.4
COPB2P35606 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.55■□□□□ 0.4
COPB2P35606 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 AC104982.3-201ENST00000581995 514 ntBASIC17.55■□□□□ 0.4
COPB2P35606 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COPB2P35606 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AC084346.2-201ENST00000607097 949 ntBASIC17.55■□□□□ 0.4
COPB2P35606 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 AL365203.3-201ENST00000609742 2057 ntBASIC17.55■□□□□ 0.4
COPB2P35606 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COPB2P35606 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COPB2P35606 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 AC105917.1-201ENST00000506637 2539 ntBASIC17.55■□□□□ 0.4
COPB2P35606 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPB2P35606 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COPB2P35606 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
COPB2P35606 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.54■□□□□ 0.4
COPB2P35606 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.54■□□□□ 0.4
COPB2P35606 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPB2P35606 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPB2P35606 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPB2P35606 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPB2P35606 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COPB2P35606 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPB2P35606 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.54■□□□□ 0.4
COPB2P35606 FAM8A4P-201ENST00000435433 1213 ntBASIC17.54■□□□□ 0.4
COPB2P35606 POM121L10P-201ENST00000436994 1285 ntBASIC17.54■□□□□ 0.4
COPB2P35606 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.54■□□□□ 0.4
COPB2P35606 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.54■□□□□ 0.4
COPB2P35606 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COPB2P35606 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COPB2P35606 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COPB2P35606 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPB2P35606 AC068587.10-201ENST00000641210 219 ntBASIC17.54■□□□□ 0.4
COPB2P35606 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms