Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.26■□□□□ 0.03
VARSP26640 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VARSP26640 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
VARSP26640 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.26■□□□□ 0.03
VARSP26640 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 AC136604.1-201ENST00000418535 575 ntBASIC15.26■□□□□ 0.03
VARSP26640 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.26■□□□□ 0.03
VARSP26640 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.26■□□□□ 0.03
VARSP26640 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.26■□□□□ 0.03
VARSP26640 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 AC127383.1-201ENST00000444697 1800 ntBASIC15.26■□□□□ 0.03
VARSP26640 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARSP26640 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VARSP26640 AL365209.1-201ENST00000624418 6473 ntBASIC15.25■□□□□ 0.03
VARSP26640 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
VARSP26640 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 UGT1A2P-201ENST00000454886 866 ntBASIC15.25■□□□□ 0.03
VARSP26640 HLA-V-204ENST00000476601 1289 ntBASIC15.25■□□□□ 0.03
VARSP26640 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.25■□□□□ 0.03
VARSP26640 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.25■□□□□ 0.03
VARSP26640 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.25■□□□□ 0.03
VARSP26640 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 AC004233.3-201ENST00000607794 1269 ntBASIC15.25■□□□□ 0.03
VARSP26640 TEX28P1-201ENST00000613479 1221 ntBASIC15.25■□□□□ 0.03
VARSP26640 TEX28P2-201ENST00000617764 1221 ntBASIC15.25■□□□□ 0.03
VARSP26640 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 AC073592.8-201ENST00000624126 511 ntBASIC15.25■□□□□ 0.03
VARSP26640 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.25■□□□□ 0.03
VARSP26640 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VARSP26640 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARSP26640 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.24■□□□□ 0.03
VARSP26640 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VARSP26640 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARSP26640 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms