Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 CICP4-201ENST00000447359 2812 ntBASIC14.38□□□□□ -0.11
TNFRSF1BP20333 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 AL513210.1-201ENST00000629608 234 ntBASIC14.38□□□□□ -0.11
TNFRSF1BP20333 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFRSF1BP20333 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AL022342.1-201ENST00000400363 863 ntBASIC14.37□□□□□ -0.11
TNFRSF1BP20333 FO393414.2-201ENST00000405153 598 ntBASIC14.37□□□□□ -0.11
TNFRSF1BP20333 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 FAM8A3P-201ENST00000427218 844 ntBASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AC026150.2-201ENST00000564693 1156 ntBASIC14.37□□□□□ -0.11
TNFRSF1BP20333 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 MIR4469-201ENST00000583919 79 ntBASIC14.37□□□□□ -0.11
TNFRSF1BP20333 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 AL671883.3-201ENST00000603274 991 ntBASIC14.37□□□□□ -0.11
TNFRSF1BP20333 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TNFRSF1BP20333 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TNFRSF1BP20333 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms