Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 AC074338.1-201ENST00000416825 156 ntBASIC15.43■□□□□ 0.06
XRCC1P18887 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.43■□□□□ 0.06
XRCC1P18887 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.43■□□□□ 0.06
XRCC1P18887 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.43■□□□□ 0.06
XRCC1P18887 RARRES2P5-201ENST00000564013 466 ntBASIC15.43■□□□□ 0.06
XRCC1P18887 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 AC104581.4-201ENST00000623126 3052 ntBASIC15.43■□□□□ 0.06
XRCC1P18887 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.43■□□□□ 0.06
XRCC1P18887 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.43■□□□□ 0.06
XRCC1P18887 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
XRCC1P18887 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC1P18887 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 GAPDHP21-201ENST00000450301 1010 ntBASIC15.42■□□□□ 0.06
XRCC1P18887 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 RN7SL692P-201ENST00000464677 288 ntBASIC15.42■□□□□ 0.06
XRCC1P18887 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.42■□□□□ 0.06
XRCC1P18887 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC1P18887 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC1P18887 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
XRCC1P18887 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC1P18887 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC1P18887 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC1P18887 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
XRCC1P18887 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
XRCC1P18887 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
XRCC1P18887 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
XRCC1P18887 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 AGAP7P-201ENST00000582299 2062 ntBASIC15.41■□□□□ 0.06
XRCC1P18887 AGAP14-201ENST00000624701 2060 ntBASIC15.41■□□□□ 0.06
XRCC1P18887 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 AC098614.1-201ENST00000368528 745 ntBASIC15.41■□□□□ 0.06
XRCC1P18887 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.41■□□□□ 0.06
XRCC1P18887 TOMM22P5-201ENST00000416399 439 ntBASIC15.41■□□□□ 0.06
XRCC1P18887 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.41■□□□□ 0.06
XRCC1P18887 NME2P1-201ENST00000426182 414 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms