Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA4P12838 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA4P12838 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 AC079781.5-202ENST00000641784 3743 ntBASIC12.63□□□□□ -0.39
DEFA4P12838 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 MIR346-201ENST00000362234 95 ntBASIC12.63□□□□□ -0.39
DEFA4P12838 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 KRT18P32-201ENST00000424695 1287 ntBASIC12.63□□□□□ -0.39
DEFA4P12838 ADH5P3-201ENST00000433842 1137 ntBASIC12.63□□□□□ -0.39
DEFA4P12838 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 ALG1L5P-201ENST00000482043 771 ntBASIC12.63□□□□□ -0.39
DEFA4P12838 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 SLC25A39P2-201ENST00000537614 270 ntBASIC12.63□□□□□ -0.39
DEFA4P12838 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.63□□□□□ -0.39
DEFA4P12838 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
DEFA4P12838 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.63□□□□□ -0.39
DEFA4P12838 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
DEFA4P12838 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA4P12838 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA4P12838 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 FOXO1B-201ENST00000504678 1527 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms