Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHGBP05060 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 AL138709.1-201ENST00000614840 1693 ntBASIC18.44■□□□□ 0.54
CHGBP05060 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 TNRC18P2-201ENST00000417666 2714 ntBASIC18.43■□□□□ 0.54
CHGBP05060 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 MROH4P-201ENST00000431302 1578 ntBASIC18.43■□□□□ 0.54
CHGBP05060 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.43■□□□□ 0.54
CHGBP05060 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHGBP05060 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.43■□□□□ 0.54
CHGBP05060 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.43■□□□□ 0.54
CHGBP05060 AC004066.1-201ENST00000502488 802 ntBASIC18.43■□□□□ 0.54
CHGBP05060 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHGBP05060 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.43■□□□□ 0.54
CHGBP05060 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHGBP05060 AC145423.3-201ENST00000615987 467 ntBASIC18.43■□□□□ 0.54
CHGBP05060 AL162274.1-201ENST00000617191 1098 ntBASIC18.43■□□□□ 0.54
CHGBP05060 MIR6775-201ENST00000617557 69 ntBASIC18.43■□□□□ 0.54
CHGBP05060 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.43■□□□□ 0.54
CHGBP05060 AL645728.2-202ENST00000641679 227 ntBASIC18.43■□□□□ 0.54
CHGBP05060 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHGBP05060 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHGBP05060 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.43■□□□□ 0.54
CHGBP05060 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 AL360270.3-201ENST00000609118 1348 ntBASIC18.43■□□□□ 0.54
CHGBP05060 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.43■□□□□ 0.54
CHGBP05060 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHGBP05060 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 AL137783.1-201ENST00000623494 1896 ntBASIC18.42■□□□□ 0.54
CHGBP05060 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.42■□□□□ 0.54
CHGBP05060 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 PTP4A1P2-201ENST00000546033 454 ntBASIC18.42■□□□□ 0.54
CHGBP05060 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.42■□□□□ 0.54
CHGBP05060 AC015936.2-201ENST00000593177 259 ntBASIC18.42■□□□□ 0.54
CHGBP05060 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.42■□□□□ 0.54
CHGBP05060 AP005019.2-201ENST00000615104 511 ntBASIC18.42■□□□□ 0.54
CHGBP05060 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHGBP05060 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.42■□□□□ 0.54
CHGBP05060 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHGBP05060 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 PDIA3P1-201ENST00000471856 1510 ntBASIC18.41■□□□□ 0.54
CHGBP05060 ACKR1-201ENST00000368121 1240 ntBASIC18.41■□□□□ 0.54
CHGBP05060 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms