Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
P04436 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.08□□□□□ -0.16
P04436 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.08□□□□□ -0.16
P04436 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.08□□□□□ -0.16
P04436 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.08□□□□□ -0.16
P04436 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04436 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.07□□□□□ -0.16
P04436 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
P04436 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P04436 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P04436 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
P04436 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
P04436 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
P04436 AL645937.2-201ENST00000396808 931 ntBASIC14.07□□□□□ -0.16
P04436 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
P04436 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 AC114812.1-204ENST00000449669 728 ntBASIC14.07□□□□□ -0.16
P04436 KLF2P4-201ENST00000451959 1225 ntBASIC14.07□□□□□ -0.16
P04436 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
P04436 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.07□□□□□ -0.16
P04436 AP005482.1-201ENST00000563722 1273 ntBASIC14.07□□□□□ -0.16
P04436 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
P04436 KRT8P35-201ENST00000483942 1338 ntBASIC14.07□□□□□ -0.16
P04436 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.07□□□□□ -0.16
P04436 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P04436 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.07□□□□□ -0.16
P04436 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.07□□□□□ -0.16
P04436 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 MSTO2P-201ENST00000314835 1709 ntBASIC14.07□□□□□ -0.16
P04436 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04436 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
P04436 AC087481.3-201ENST00000602886 1894 ntBASIC14.06□□□□□ -0.16
P04436 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
P04436 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
P04436 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.06□□□□□ -0.16
P04436 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 MIR1909-201ENST00000411312 80 ntBASIC14.06□□□□□ -0.16
P04436 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
P04436 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.06□□□□□ -0.16
P04436 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04436 AC016694.1-201ENST00000434179 700 ntBASIC14.06□□□□□ -0.16
P04436 AC022210.1-201ENST00000449856 793 ntBASIC14.06□□□□□ -0.16
P04436 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
P04436 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
P04436 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.06□□□□□ -0.16
P04436 SAMD11P1-201ENST00000571429 661 ntBASIC14.06□□□□□ -0.16
P04436 MIR6752-201ENST00000618442 71 ntBASIC14.06□□□□□ -0.16
P04436 OR2I1P-209ENST00000641730 5365 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms