Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 RN7SL692P-201ENST00000464677 288 ntBASIC16.19■□□□□ 0.18
APOEP02649 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.19■□□□□ 0.18
APOEP02649 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 WASH4P-201ENST00000564273 1246 ntBASIC16.19■□□□□ 0.18
APOEP02649 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.19■□□□□ 0.18
APOEP02649 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.19■□□□□ 0.18
APOEP02649 AC105233.6-201ENST00000642093 218 ntBASIC16.19■□□□□ 0.18
APOEP02649 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 AP002414.2-201ENST00000591780 3365 ntBASIC16.19■□□□□ 0.18
APOEP02649 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
APOEP02649 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.19■□□□□ 0.18
APOEP02649 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APOEP02649 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.18■□□□□ 0.18
APOEP02649 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 AC098614.1-201ENST00000368528 745 ntBASIC16.18■□□□□ 0.18
APOEP02649 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.18■□□□□ 0.18
APOEP02649 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 AP006294.1-201ENST00000415407 339 ntBASIC16.18■□□□□ 0.18
APOEP02649 AC098850.1-201ENST00000419919 790 ntBASIC16.18■□□□□ 0.18
APOEP02649 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.18■□□□□ 0.18
APOEP02649 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.18■□□□□ 0.18
APOEP02649 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
APOEP02649 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.18■□□□□ 0.18
APOEP02649 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.18■□□□□ 0.18
APOEP02649 AL049840.4-201ENST00000602422 811 ntBASIC16.18■□□□□ 0.18
APOEP02649 TMEM261P1-201ENST00000604899 340 ntBASIC16.18■□□□□ 0.18
APOEP02649 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
APOEP02649 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
APOEP02649 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.18■□□□□ 0.18
APOEP02649 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.18■□□□□ 0.18
APOEP02649 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
APOEP02649 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APOEP02649 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOEP02649 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOEP02649 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms