Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.99□□□□□ -0.01
TNFP01375 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.99□□□□□ -0.01
TNFP01375 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.99□□□□□ -0.01
TNFP01375 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.99□□□□□ -0.01
TNFP01375 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.99□□□□□ -0.01
TNFP01375 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.99□□□□□ -0.01
TNFP01375 ECM1P1-201ENST00000604092 1279 ntBASIC14.99□□□□□ -0.01
TNFP01375 ENPP7P14-201ENST00000621765 1040 ntBASIC14.99□□□□□ -0.01
TNFP01375 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFP01375 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFP01375 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFP01375 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.99□□□□□ -0.01
TNFP01375 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFP01375 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFP01375 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFP01375 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFP01375 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TNFP01375 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFP01375 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TNFP01375 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TNFP01375 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFP01375 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFP01375 RPL13AP20-201ENST00000459725 609 ntBASIC14.98□□□□□ -0.01
TNFP01375 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFP01375 FAM8A2P-201ENST00000528813 1142 ntBASIC14.98□□□□□ -0.01
TNFP01375 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFP01375 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFP01375 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFP01375 MIR4525-201ENST00000580000 75 ntBASIC14.98□□□□□ -0.01
TNFP01375 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFP01375 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFP01375 AL603764.1-201ENST00000636452 321 ntBASIC14.98□□□□□ -0.01
TNFP01375 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TNFP01375 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 AC063926.3-201ENST00000624734 5658 ntBASIC14.98□□□□□ -0.01
TNFP01375 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFP01375 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFP01375 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFP01375 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
TNFP01375 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TNFP01375 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TNFP01375 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TNFP01375 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFP01375 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFP01375 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.97□□□□□ -0.01
TNFP01375 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms