Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 REXO1L4P-201ENST00000605109 1937 ntBASIC17.94■□□□□ 0.46
CDKL5O76039 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKL5O76039 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDKL5O76039 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.93■□□□□ 0.46
CDKL5O76039 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 AC004066.1-201ENST00000502488 802 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 GAPDHP40-201ENST00000505218 1006 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.93■□□□□ 0.46
CDKL5O76039 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKL5O76039 AC055876.2-201ENST00000531834 546 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.93■□□□□ 0.46
CDKL5O76039 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.93■□□□□ 0.46
CDKL5O76039 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CDKL5O76039 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKL5O76039 AC099568.2-201ENST00000609194 695 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 AJ011932.1-201ENST00000621707 465 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 AP000845.1-201ENST00000581677 2131 ntBASIC17.93■□□□□ 0.46
CDKL5O76039 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL5O76039 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDKL5O76039 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDKL5O76039 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL5O76039 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDKL5O76039 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.92■□□□□ 0.46
CDKL5O76039 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL5O76039 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL5O76039 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL5O76039 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL5O76039 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL5O76039 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.92■□□□□ 0.46
CDKL5O76039 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDKL5O76039 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL5O76039 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDKL5O76039 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 MYO15B-237ENST00000642007 4893 ntBASIC17.92■□□□□ 0.46
CDKL5O76039 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL5O76039 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL5O76039 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 AP002414.2-201ENST00000591780 3365 ntBASIC17.91■□□□□ 0.46
CDKL5O76039 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDKL5O76039 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CDKL5O76039 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKL5O76039 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.91■□□□□ 0.46
CDKL5O76039 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL5O76039 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKL5O76039 AL049840.4-201ENST00000602422 811 ntBASIC17.91■□□□□ 0.46
CDKL5O76039 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKL5O76039 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL5O76039 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.91■□□□□ 0.46
CDKL5O76039 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms