Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
XRCC2O43543 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
XRCC2O43543 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
XRCC2O43543 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.47□□□□□ -0.25
XRCC2O43543 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.47□□□□□ -0.25
XRCC2O43543 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.47□□□□□ -0.25
XRCC2O43543 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.47□□□□□ -0.25
XRCC2O43543 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
XRCC2O43543 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.47□□□□□ -0.25
XRCC2O43543 KRT18P64-201ENST00000434946 1219 ntBASIC13.47□□□□□ -0.25
XRCC2O43543 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.47□□□□□ -0.25
XRCC2O43543 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.47□□□□□ -0.25
XRCC2O43543 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.47□□□□□ -0.25
XRCC2O43543 TIMM17BP1-201ENST00000545713 516 ntBASIC13.47□□□□□ -0.25
XRCC2O43543 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.47□□□□□ -0.25
XRCC2O43543 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.47□□□□□ -0.25
XRCC2O43543 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.47□□□□□ -0.25
XRCC2O43543 AL590560.3-201ENST00000623350 461 ntBASIC13.47□□□□□ -0.25
XRCC2O43543 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 AF228730.6-201ENST00000641497 218 ntBASIC13.47□□□□□ -0.25
XRCC2O43543 AC084121.3-201ENST00000641716 218 ntBASIC13.47□□□□□ -0.25
XRCC2O43543 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.47□□□□□ -0.25
XRCC2O43543 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.47□□□□□ -0.25
XRCC2O43543 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.47□□□□□ -0.25
XRCC2O43543 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.47□□□□□ -0.25
XRCC2O43543 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
XRCC2O43543 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.47□□□□□ -0.25
XRCC2O43543 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.47□□□□□ -0.25
XRCC2O43543 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
XRCC2O43543 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
XRCC2O43543 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 WASH3P-207ENST00000560956 1394 ntBASIC13.46□□□□□ -0.25
XRCC2O43543 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.46□□□□□ -0.25
XRCC2O43543 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 AL121723.1-201ENST00000445194 1519 ntBASIC13.46□□□□□ -0.25
XRCC2O43543 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
XRCC2O43543 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.46□□□□□ -0.25
XRCC2O43543 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.46□□□□□ -0.25
XRCC2O43543 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
XRCC2O43543 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
XRCC2O43543 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.46□□□□□ -0.25
XRCC2O43543 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.46□□□□□ -0.25
XRCC2O43543 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
XRCC2O43543 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.46□□□□□ -0.25
XRCC2O43543 AL844908.2-201ENST00000609461 460 ntBASIC13.46□□□□□ -0.25
XRCC2O43543 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.46□□□□□ -0.25
XRCC2O43543 AL645728.2-202ENST00000641679 227 ntBASIC13.46□□□□□ -0.25
XRCC2O43543 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
XRCC2O43543 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 BTBD7P1-201ENST00000447253 1453 ntBASIC13.46□□□□□ -0.25
XRCC2O43543 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
XRCC2O43543 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
XRCC2O43543 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
XRCC2O43543 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
XRCC2O43543 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
XRCC2O43543 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms