Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 AL353779.1-201ENST00000434793 351 ntBASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 API5-211ENST00000534695 560 ntTSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 CHCHD2P3-201ENST00000603038 451 ntBASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 SLC7A15P-201ENST00000424028 1363 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AC087499.6-201ENST00000411576 835 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 MEP1AP4-201ENST00000423244 1087 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AC008494.3-201ENST00000606615 944 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AC007431.3-201ENST00000623221 587 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AL158212.4-201ENST00000624062 1286 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPH3AQ9Y2J0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.23□□□□□ -0.13
RPH3AQ9Y2J0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms