Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 SSR4P1-203ENST00000599569 2260 ntBASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AL355864.2-201ENST00000447420 863 ntBASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AL365330.1-201ENST00000607459 531 ntBASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC104581.4-201ENST00000623126 3052 ntBASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.37■□□□□ 0.21
ARHGEF3Q9NR81 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AL359258.3-201ENST00000622910 2331 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 LINC02447-202ENST00000501888 2146 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 GOLGA2P4-201ENST00000441462 777 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 YBX1P6-201ENST00000442962 1002 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 FAM86LP-201ENST00000478302 853 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AP001889.1-201ENST00000525414 633 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AP000812.2-201ENST00000538934 718 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 MIR4321-201ENST00000592276 80 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 BRI3BPP1-201ENST00000594224 787 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 AL139099.5-201ENST00000635274 300 ntBASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF3Q9NR81 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms