Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 CRB3P1-201ENST00000449338 276 ntBASIC13.24□□□□□ -0.29
GCM1Q9NP62 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 KRT18P43-201ENST00000469825 1281 ntBASIC13.24□□□□□ -0.29
GCM1Q9NP62 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 API5-211ENST00000534695 560 ntTSL 5 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AC036164.1-201ENST00000570544 333 ntBASIC13.24□□□□□ -0.29
GCM1Q9NP62 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AC092850.2-201ENST00000623821 2697 ntBASIC13.24□□□□□ -0.29
GCM1Q9NP62 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 AL121723.1-201ENST00000445194 1519 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AL133267.1-201ENST00000398220 340 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCM1Q9NP62 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 LINC02084-201ENST00000606069 1096 ntBASIC13.23□□□□□ -0.29
GCM1Q9NP62 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GCM1Q9NP62 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms