Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF41Q9H4P4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF41Q9H4P4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF41Q9H4P4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF41Q9H4P4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF41Q9H4P4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF41Q9H4P4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.14■□□□□ 0.5
RNF41Q9H4P4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF41Q9H4P4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
RNF41Q9H4P4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF41Q9H4P4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 FLJ16779-201ENST00000612722 7638 ntBASIC18.14■□□□□ 0.49
RNF41Q9H4P4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 BAATP1-201ENST00000412284 1225 ntBASIC18.14■□□□□ 0.49
RNF41Q9H4P4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 AC068587.3-201ENST00000526613 355 ntBASIC18.14■□□□□ 0.49
RNF41Q9H4P4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 WASH3P-207ENST00000560956 1394 ntBASIC18.14■□□□□ 0.49
RNF41Q9H4P4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF41Q9H4P4 REXO1L4P-201ENST00000605109 1937 ntBASIC18.13■□□□□ 0.49
RNF41Q9H4P4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC013268.4-201ENST00000637413 2228 ntBASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC012441.1-201ENST00000446669 685 ntBASIC18.13■□□□□ 0.49
RNF41Q9H4P4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 AC126177.1-201ENST00000547829 2218 ntBASIC18.13■□□□□ 0.49
RNF41Q9H4P4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF41Q9H4P4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 NORAD-201ENST00000565493 5339 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms